MRIQC: individual T1w report

Summary

  • BIDS filename: sub-4082_ses-1_T1w.
  • Date and time: 2022-11-03, 03:25.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Detected a zero-filled frame, has the original image been rotated?

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5062639071589995
cnr2.609511039580767
efc0.6526030056891372
fber1411.1885387811635
fwhmavg4.418763333333334
fwhmx4.30463
fwhmy5.0285
fwhmz3.92316
icvscsf0.19807517877879388
icvsgm0.4129844121836562
icvswm0.3889404090375499
inumed1.4743720293045044
inurange0.7634064912796019
qi14.22073686391577e-05
qi20.005586377863618062
rpvecsf23.28098680580862
rpvegm11.707532353278284
rpvewm14.850966733158792
sizex176
sizey256
sizez256
snrcsf2.3568690898703943
snrgm10.334706327295786
snrtotal10.54387354263721
snrwm18.940045210745453
snrdcsf31.11634505515555
snrdgm63.168441862032424
snrdtotal59.08665806355172
snrdwm82.97518727346717
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk61.07096232057286
summarybgmad7.895569554976797
summarybgmean21.121736819408973
summarybgmedian18.98377250880003
summarybgn2119942.0
summarybgp054.761606305837631
summarybgp9542.791804037988186
summarybgstdv12.413823116590628
summarycsfk82.13064417525199
summarycsfmad94.32883391857573
summarycsfmean404.32298559266985
summarycsfmedian375.0078229419887
summarycsfn26838.0
summarycsfp05261.7630413919687
summarycsfp95607.4368633814153
summarycsfstdv159.10974350686774
summarygmk0.5333490546867323
summarygmmad69.29523397661988
summarygmmean765.5127306561567
summarygmmedian761.2931345030665
summarygmn19136.0
summarygmp05651.776189468801
summarygmp95894.8843851033598
summarygmstdv73.66181664833516
summarywmk0.20241610854270897
summarywmmad51.553424741319084
summarywmmean999.3484117260689
summarywmmedian999.999976940453
summarywmn249882.0
summarywmp05911.3463858515024
summarywmp951084.894405156374
summarywmstdv52.79807755826856
tpmoverlapcsf0.15356005728244781
tpmoverlapgm0.4291967451572418
tpmoverlapwm0.4822564125061035
wm2max0.5556322867230816
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime14:40:7.855000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[-0.0117478, 0.989893, 0.141326, -0.0383853, 0.140785, -0.989296]
ImageOrientationTextSag>Tra(2.1)>Cor(-1.0)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.258
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.034133
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber19
ShimSetting[2609, 5472, -7435, 232, -28, -874, 138, -130]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp260.995
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sum85fa0a6577cdbe8fe41b0dd5e5ddd292
softwaremriqc
version0.16.1
Rate Image
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.